PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_049330_hurx.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 204aa    MW: 23357.5 Da    PI: 8.0735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_049330_hurx.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83e-1152101355
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++  rEr RR+++N++f +L ++l +    ++ K +K +iL  A++ +k+L+
  Bv3_049330_hurx.t1  52 KSKACRERERREKLNDSFLNLSSVLEPG---RAVKTDKLAILSDAIRVVKQLR 101
                         67889**********************9...9*******************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-1341117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.55E-748105No hitNo description
PROSITE profilePS5088813.51649100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-853100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.6E-1055106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-1356122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MIQEQESDRQ LPRKSSCFEI DFSQTSSVLQ EQESELECPK KRGRSAVSSK PKSKACRERE  60
RREKLNDSFL NLSSVLEPGR AVKTDKLAIL SDAIRVVKQL RTEAEEHKEE NKKLQEEIES  120
LKAEKNELRD EKSTLKAEKE KMEQHFKAMS VPGSGMIPPY PPAYQAGPNK MAVYPSYGMF  180
PMWHYLPPAT RDTSHDHELR PPAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13844PKKRGRS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010671056.11e-149PREDICTED: transcription factor bHLH104
SwissprotQ8L4673e-69BH104_ARATH; Transcription factor bHLH104
TrEMBLA0A0J8CSQ71e-149A0A0J8CSQ7_BETVU; Uncharacterized protein
STRINGVIT_05s0049g00460.t013e-76(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-69bHLH family protein